Prediction models of five brain region gene expression in rats.

See description in Santhanam, Sanchez Roige, et al (2024).

Download link

To query the database, checkout this post


Natasha Santhanam, Sandra Sanchez-Roige, Yanyu Liang, Apurva S. Chitre, Daniel Munro, Denghui Chen, Riyan Cheng, Festus Nyasimi, Margaret Perry, Jianjun Gao, Anthony M. George, Alex Gileta, Katie Holl, Alesa Hughson, Christopher P. King, Alexander C. Lamparelli, Connor D. Martin, Angel Garcia Martinez, Sabrina Mi, Celine L. St. Pierre, Jordan Tripi, Tengfei Wang, Hao Chen, Shelly Flagel, Keita Ishiwari, Paul Meyer, Laura Saba, Leah C. Solberg Woods, Oksana Polesskaya, Abraham A. Palmer, Hae Kyung Im, RatXcan: Framework for translating genetic results between species via transcriptome-wide association analyses, bioRxiv 2022.06.03.494719; doi:

Munro, D., Wang, T., Chitre, A. S., Polesskaya, O., Ehsan, N., Gao, J., Gusev, A., Woods, L. C. S., Saba, L. M., Chen, H., Palmer, A. A., & Mohammadi, P. (2022). The regulatory landscape of multiple brain regions in outbred heterogeneous stock rats. Nucleic Acids Research, 50(19), 10882–10895.


Text and figures are licensed under Creative Commons Attribution CC BY 4.0. The source code is licensed under MIT.

Suggest changes

If you find any mistakes (including typos) or want to suggest changes, please feel free to edit the source file of this page on Github and create a pull request.


For attribution, please cite this work as

Haky Im (2024). Ratxcan brain prediction models. PredictDB. /post/2024/02/28/ratxcan-brain-prediction-models/

BibTeX citation

  title = "Ratxcan brain prediction models",
  author = "Haky Im",
  year = "2024",
  journal = "PredictDB",
  note = "/post/2024/02/28/ratxcan-brain-prediction-models/"